A body has been recovered from the wreckage of the plane which crashed with Cardiff City footballer Emiliano Sala and pilot David Ibbotson on board.
The Air Accidents Investigation Branch said specialist contractors joined the operation in "challenging conditions".
It was carried out in "as dignified a way as possible" and the men's families were kept updated throughout, it said.
The wreckage of the plane, which vanished two weeks ago over the English Channel, was found off Guernsey.
The Geo Ocean III, the boat carrying the body, arrived at Portland Port in Dorset on Thursday morning as it is the nearest part of the British mainland to where the plane was located.
Dorset Police said: "The arrival of the body into Dorset has been reported to the coroner for Dorset.
"The coroner will investigate the circumstances of this death supported by Dorset Police. A post-mortem examination will be held in due course."
No formal identification has taken place, but the force said both families had been updated.
The Piper Malibu N264DB was en route from France to Cardiff, after the 28-year-old Argentine striker made a quick trip back to his former club Nantes two days after his £15m transfer to Cardiff was announced.
Mr Ibbotson, 59, from Crowle, North Lincolnshire, was at the controls when the flight lost contact with air traffic controllers on 21 January.
An official search was called off on 24 January after Guernsey's harbour master said the chances of survival were "extremely remote".
But an online appeal started by Sala's agent raised £324,000 (371,000 euros) for a private search led by marine scientist and oceanographer David Mearns.
Working jointly with the AAIB, his ship and the Geo Ocean III, began combing a four square mile area of the English Channel, 24 nautical miles north of Guernsey, to make best use of the available sensors.
Mr Mearns said the plane was identified by sonar, before a submersible with cameras was sent underwater to confirm this.
The AAIB used a remotely operated underwater vehicle (ROV) to aid the search, with no divers involved.
The body was moved first, and separately from the wreckage, to maximise the chances of it being successfully brought to the surface.
It said efforts to recover the crashed plane as a whole proved unsuccessful, before being abandoned due to poor weather.
"The weather forecast is poor for the foreseeable future and so the difficult decision was taken to bring the overall operation to a close," the AAIB said in a statement.
However, the AAIB said video footage captured by the ROV would provide "valuable evidence" for its safety investigation.
Meanwhile, it has emerged that Sala's former club, French Ligue 1 side Nantes, has demanded Cardiff City pay his £15m transfer fee.
Sala, 28, was Cardiff's record signing but never played for the club.
The fee was due to be paid over three years but Cardiff have withheld the first scheduled payment until they are satisfied with the documentation.